Re: [Freesurfer] Processing 7T data

2016-10-07 Thread Bruce Fischl
von Damien MARIE Gesendet: Donnerstag, 6. Oktober 2016 14:01 An: freesurfer@nmr.mgh.harvard.edu Betreff: [Freesurfer] Processing 7T data Dear experts, I plan to process some MRI 7T data, 0.6 mm^3 isotropic voxel size. The aim is to look a R1 maps. I was wondering what was your opinion conc

Re: [Freesurfer] Processing 7T data

2016-10-07 Thread Damien MARIE
> Best, > Falk > > -Ursprüngliche Nachricht- > Von: freesurfer-boun...@nmr.mgh.harvard.edu > [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Damien MARIE > Gesendet: Donnerstag, 6. Oktober 2016 14:01 > An: freesurfer@nmr.mgh.harvard.edu > Betreff: [Freesurfer]

Re: [Freesurfer] Processing 7T data

2016-10-07 Thread Natalia Zaretskaya
Hi Damien, please be sure to check with our wiki page on there recommended way to run submillimeter recons with v6. https://surfer.nmr.mgh.harvard.edu/fswiki/SubmillimeterRecon It is still work in progress, and the described procedu

Re: [Freesurfer] Processing 7T data

2016-10-06 Thread Bruce Fischl
Hi Damein 6.0 beta will handle this *much* better if you can wait. cheers Bruce On Thu, 6 Oct 2016, Damien MARIE wrote: > Dear experts, > > I plan to process some MRI 7T data, 0.6 mm^3 isotropic voxel size. The aim is > to look a R1 maps. > > I was wondering what was your opinion concerning th

Re: [Freesurfer] Processing 7T data

2016-10-06 Thread Falk Lüsebrink
arvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Damien MARIE Gesendet: Donnerstag, 6. Oktober 2016 14:01 An: freesurfer@nmr.mgh.harvard.edu Betreff: [Freesurfer] Processing 7T data Dear experts, I plan to process some MRI 7T data, 0.6 mm^3 isotropic voxel size. The aim i

Re: [Freesurfer] Processing 7T data

2016-10-06 Thread Kevin Aquino
Hi Damien, I have tested using the HighResRecon vs Freesurfer beta on 0.7 mm^3 data and have preferred the segmentations on the beta version. Cheers, *Dr Kevin Aquino* Research fellow, Sir Peter Mansfield Magnetic Resonance Center, The University of Nottingham. Honorary Research Fellow School

[Freesurfer] Processing 7T data

2016-10-06 Thread Damien MARIE
Dear experts, I plan to process some MRI 7T data, 0.6 mm^3 isotropic voxel size. The aim is to look a R1 maps. I was wondering what was your opinion concerning the downsampling to 1 mm^3 (performed by the current FreeSurfer version if I am correct). What do you think would be the best: FreeSur