Re: [Freesurfer] Process with a 0.23T scan

2014-09-08 Thread Bruce Fischl
Hi Merlin hmmm, I 've never seen data from such a low field scanner. Have you tried running it through recon-all? I would worry that it is quite noisy. Try it and see how it goes. And no, there is no way to only get caudate - you need to run at least through the end of autorecon2 to get the co

[Freesurfer] Process with a 0.23T scan

2014-09-08 Thread merlinva2012
Dears experts, I would be very grateful if help me with the following doubts: 1- My data was collected with a 0.23T scan. How i can process it?,Should i make any kind of pre-process before to begin with recon-all? 2- I want only to get the statistics of the caudate nucleus. Is there any way to obt