Re: [Freesurfer] Problem with Longitudinal QDEC file and mris_preproc

2015-03-12 Thread Jennifer Legault
Hi Martin, Thank you for your help and clarifications. I did run the *_to_table commands and now my LME analyses are running smoothly. Best, Jennifer Legault On Mon, Mar 9, 2015 at 11:35 AM, Martin Reuter wrote: > Hi Jennifer, > > if you are interested in volumes from the stats file, you need

Re: [Freesurfer] Problem with Longitudinal QDEC file and mris_preproc

2015-03-09 Thread Martin Reuter
Hi Jennifer, if you are interested in volumes from the stats file, you need to use aseg_stats_to_table and aparc_stats… to stack those data across subjects and time points into a single table that you then analyze with the LME tools. mris_preproc is only for stacking surface maps. The longitud

[Freesurfer] Problem with Longitudinal QDEC file and mris_preproc

2015-03-06 Thread Jennifer Legault
Hi all, I am new to Freesurfer and have run my participants’ data through the longitudinal preprocessing stream and am now trying to assemble my data so that they can be put into a linear mixed effect model analysis. While the longitudinal tutorial with cortical thickness data is very helpful, I