Re: [Freesurfer] problem converting .ima files

can you try it on a linux machine and see if you are still having problems? On Thu, 15 Jul 2010, Doug Greve wrote: > > wow, I have no clue. You can tar up the data and drop it to me at the > file drop. But I just want to warn you that it might take me a while > to get to. > > doug > > > > On Thu,

Re: [Freesurfer] problem converting .ima files

wow, I have no clue. You can tar up the data and drop it to me at the file drop. But I just want to warn you that it might take me a while to get to. doug On Thu, 15 Jul 2010, Scott Hayes wrote: > Hi, > I am trying to convert .ima files, and my command seems to work fine for > some series: >

[Freesurfer] problem converting .ima files

Hi, I am trying to convert .ima files, and my command seems to work fine for some series: >mri_convert -it siemens -ot nii 523-2-4.ima ../srs2.nii but not others: >mri_convert -it siemens -ot nii 523-3-132.ima ../srs3.nii These are series collected from the same scan session. The data were

Re: [Freesurfer] Problem converting IMA files

Walhovd Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Problem converting IMA files Hi Kristine, mri_convert should handle ima files. Have you tried -it siemens? Are they named .ima? cheers, Bruce On Tue, 19 Apr 2005, Kristine Beate Walhovd wrote: Hi I've tried conve

RE: [Freesurfer] Problem converting IMA files

urfer@nmr.mgh.harvard.edu Subject:Re: [Freesurfer] Problem converting IMA files What was your exact command-line? Did you try adding "-it siemens"? Also, I could not read the attachment. Is it in text/ascii format? doug Kristine Beate Walhovd wrote: > > Hi > > I&#x

RE: [Freesurfer] Problem converting IMA files

-it siemens instead of -ot cor it does the same thing. Thanks, Kristine -Original Message- From: Doug Greve [mailto:[EMAIL PROTECTED] Sent: Tue 4/19/2005 2:42 AM To: Kristine Beate Walhovd Cc: freesurfer@nmr.mgh.harvard.edu Subject:Re: [Freesurfer] Problem converting

Re: [Freesurfer] Problem converting IMA files

What was your exact command-line? Did you try adding "-it siemens"? Also, I could not read the attachment. Is it in text/ascii format? doug Kristine Beate Walhovd wrote: > > Hi > > I've tried converting IMA files (taken directly from the Siemens scanner) in > Freesurfer with the command >

RE: [Freesurfer] Problem converting IMA files

disk I got them from likely caused the problem. Thanks, Kristine -Original Message- From: Bruce Fischl [mailto:[EMAIL PROTECTED] Sent: Tue 4/19/2005 12:00 AM To: Kristine Beate Walhovd Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Problem converting IM

RE: [Freesurfer] Problem converting IMA files

ECTED] Sent: Tue 4/19/2005 12:00 AM To: Kristine Beate Walhovd Cc: freesurfer@nmr.mgh.harvard.edu Subject:Re: [Freesurfer] Problem converting IMA files Hi Kristine, mri_convert should handle ima files. Have you tried -it siemens? Are they named .ima? cheers, Bruce On Tue, 1

Re: [Freesurfer] Problem converting IMA files

Hi Kristine, mri_convert should handle ima files. Have you tried -it siemens? Are they named .ima? cheers, Bruce On Tue, 19 Apr 2005, Kristine Beate Walhovd wrote: Hi I've tried converting IMA files (taken directly from the Siemens scanner) in Freesurfer with the command mri_convert -ot cor bu

[Freesurfer] Problem converting IMA files

Hi I've tried converting IMA files (taken directly from the Siemens scanner) in Freesurfer with the command mri_convert -ot cor but it doesn't work. Gives an error message "cannot parse..." (see attached error message). I'd be grateful for any suggestions. Thanks, Kristine IMA_error