Re: [Freesurfer] PetSurfer - MG coregister

2023-01-23 Thread Douglas N. Greve
When you load it into freeview, use the aux/bbpet2anat.lta , eg, freeview orig.mgz aseg.mgz mgx.ctxgm.nii.gz:reg=aux/bbpet2anat.lta On 1/17/2023 12:46 PM, Marina Fernández wrote: External Email - Use Caution Dear experts, I am trying to do PVC on FBB-PET images using the following co

Re: [Freesurfer] PetSurfer - MG coregister

2023-01-18 Thread Rahul Sharma
External Email - Use Caution Thank you so much. Now I at least get a direction from where to start. Regards: Rahul Sharma Research Scholar NIT Silchar Assam 9827834360 *"Manners Maketh Man"* On Wed, Jan 18, 2023 at 5:36 PM Marina Fernández < marina.fdez.alva...@gmail.com> wro

Re: [Freesurfer] PetSurfer - MG coregister

2023-01-18 Thread Marina Fernández
External Email - Use Caution Dear Rahul, I just used the wiki of the Freesurfer functions, the information is very complete. If you want to use Freesurfer, you can start by doing the cortical reconstruction process for each subject ( https://secure-web.cisco.com/1Lj_XzmtE_iAYreTtm

Re: [Freesurfer] PetSurfer - MG coregister

2023-01-17 Thread Rahul Sharma
External Email - Use Caution Hello Mam, I am not replying to your mail, instead I need to know the source where you learn Freesurfer and pre processing of MRI and PET. Please do reply. On Tue, 17 Jan 2023, 11:16 pm Marina Fernández, < marina.fdez.alva...@gmail.com> wrote: >

[Freesurfer] PetSurfer - MG coregister

2023-01-17 Thread Marina Fernández
External Email - Use Caution Dear experts, I am trying to do PVC on FBB-PET images using the following commands: " mri_coreg --s s_001 --mov s_001_pet_fbb.nii.gz --reg s_001_pet_fbb.reg.lta mri_gtmpvc --i s_001_pet_fbb.nii.gz --reg s_001_pet_fbb.reg.lta --psf 6 --seg gtmseg.mgz