Re: [Freesurfer] Overlay electric field distribution on pial surface

2018-10-03 Thread Bruce Fischl
urfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] namens Meusen - Klooster, D.C.W. > [d.c.w.kloos...@tue.nl] > Verzonden: dinsdag 2 oktober 2018 17:37 > Aan: Freesurfer support list > Onderwerp: Re: [Freesurfer] Overlay electric field distribution on pia

Re: [Freesurfer] Overlay electric field distribution on pial surface

2018-10-03 Thread Meusen - Klooster, D.C.W.
Onderwerp: Re: [Freesurfer] Overlay electric field distribution on pial surface External Email - Use Caution Yes, I made a (pretty stupid) mistake in the coregistration. The overlay is working perfectly now. Only for the visualization, is it possible to set my colorbar from 1 (blue) to

Re: [Freesurfer] Overlay electric field distribution on pial surface

2018-10-02 Thread Meusen - Klooster, D.C.W.
17:04 Aan: freesurfer@nmr.mgh.harvard.edu Onderwerp: Re: [Freesurfer] Overlay electric field distribution on pial surface Did you look at the results of the registration to make sure that they are ok? But you probably don't need to run the registration anyway since the surfaces are in the T1.mgz space

Re: [Freesurfer] Overlay electric field distribution on pial surface

2018-09-17 Thread Douglas Greve
> Van: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] namens Bruce Fischl > [fis...@nmr.mgh.harvard.edu] > Verzonden: zaterdag 15 september 2018 17:21 > Aan: Freesurfer support list > Onderwerp: Re: [Freesurfer] Overlay electric field distr

Re: [Freesurfer] Overlay electric field distribution on pial surface

2018-09-17 Thread Meusen - Klooster, D.C.W.
Van: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] namens Bruce Fischl [fis...@nmr.mgh.harvard.edu] Verzonden: zaterdag 15 september 2018 17:21 Aan: Freesurfer support list Onderwerp: Re: [Freesurfer] Overlay electric field

Re: [Freesurfer] Overlay electric field distribution on pial surface

2018-09-15 Thread Bruce Fischl
Hi Debby you need to give us a lot more information. What commands did you use to sample the field onto the surface? What was the output of those commands? Note that tksurfer is deprecated, so I wouldn't worry about how it looks cheers Bruce On Sat, 15 Sep 2018, Meusen - Klooster, D.C.W. w

[Freesurfer] Overlay electric field distribution on pial surface

2018-09-15 Thread Meusen - Klooster, D.C.W.
External Email - Use Caution Dear all, I am studying transcranial magnetic stimulation (TMS) and would like to nicely visualize my TMS induced electric fields over a pial surface, preferably using Freesurfer to stay in line with my other images. I have a .nii file of the electri