Re: [Freesurfer] Outline files convert

2009-03-20 Thread Bruce Fischl
Hi Flavio, you should contact the CMA guys. I think mri_convert can do this, but I haven't really tried. cheers Bruce On Thu, 19 Mar 2009, Flavio Seixas wrote: Hi All, I've got from IBSR (Internet Brain Segmentation Repository) MR images and their subcortical structures segmented manually.

[Freesurfer] Outline files convert

2009-03-19 Thread Flavio Seixas
Hi All, I've got from IBSR (Internet Brain Segmentation Repository) MR images and their subcortical structures segmented manually. The segmented images are saved in Outline (.OTL) format. How could I convert from .OTL to .IMG or .NII (Analyze) format using mri_convert? Are there any examples? I