[Freesurfer] New segmentation of thalamic nuclei

External Email - Use Caution Dear FreeSurfer users, It is my pleasure to announce that our new tool to segment the thalamic nuclei from structural MR scans is available in the development version of FreeSurfer. The tool relies on an atlas derived from manual annotations made on

Re: [Freesurfer] new segmentation error

I tried creating an empty directory first and it still gave the same error. -Keyma Quoting "Brian T. Quinn" <[EMAIL PROTECTED]>: YOU> i believe you have to create the directory first. YOU> YOU> Brian T. Quinn YOU> MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging YOU> Bldg. 149,

Re: [Freesurfer] new segmentation error

i believe you have to create the directory first. Brian T. Quinn MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging Bldg. 149, 13th Street, CNY 2301 Charlestown, MA 02129 On Wed, 14 Jul 2004, Chekema Nayasha Prince wrote: I used the new segmentation in tkmedit to draw labels in the ori

[Freesurfer] new segmentation error

I used the new segmentation in tkmedit to draw labels in the orig volume. When I went to "File-> Save segmentation As" and tried to same it in a new directory I got the following error: "Error:Invalid Command Name "Save Segmentation"" Is there another way to save the segmentation volume? -Keyma

Re: [Freesurfer] New Segmentation

the steps for drawing a new segmentation are: 1. File->New Segmentation 2. define your colortable in the dialog box 3. Tools->Edit Segmentation 4. Tools->Configure Segmentation Brush good luck, Brian T. Quinn MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging Bldg. 149, 13th Street, C

Re: [Freesurfer] New Segmentation

nevermind I found what i'm looking for. Keyma Prince Massachusetts Institute of Technology Department of Brain and Cognitive Sciences NE20-392 Cambridge, MA 02139 On Thu, 20 May 2004, Keyma Prince wrote: > I'm trying to draw a label onto the T1 brain by using the "New > Segmentation" tool in TkM

[Freesurfer] New Segmentation

I'm trying to draw a label onto the T1 brain by using the "New Segmentation" tool in TkMedit. When you select a color table shouldn't an additional window appear with the different label options within it? -keyma Keyma Prince Massachusetts Institute of Technology Department of Brain and Cognitiv