Re: [Freesurfer] Motor Cortex Label/Mask

2020-07-23 Thread Douglas N. Greve
we don't have a specific label for that, though if you can find a set of labels that meet your requirements, then you can merge them together On 7/17/2020 1:48 PM, Anja Samardzija wrote: External Email - Use Caution Hi, I am referring to the anatomical region of interest - the surfac

Re: [Freesurfer] Motor Cortex Label/Mask

2020-07-17 Thread Anja Samardzija
External Email - Use Caution Hi, I am referring to the anatomical region of interest - the surface. The way that we are able to label the Left-Putamen for example, I would like to be able to label the whole motor cortex. The motor cortex should include the primary motor cortex, pr

Re: [Freesurfer] Motor Cortex Label/Mask

2020-07-17 Thread Douglas N. Greve
what do you mean by "extract"? In the volume? the surface? or just compute the volume of it? How are you defining motor cortex? On 7/17/2020 1:29 PM, Anja Samardzija wrote: External Email - Use Caution Hi, I was wondering if there is a way to extract the whole motor cortex (not the

[Freesurfer] Motor Cortex Label/Mask

2020-07-17 Thread Anja Samardzija
External Email - Use Caution Hi, I was wondering if there is a way to extract the whole motor cortex (not the separate regions of the motor cortex, but all of these regions together) of a subject following running recon-all on the subject. Thank you, Anja