Re: [Freesurfer] Mean p-value of uncorrected cluster in Qdec

2019-10-24 Thread Greve, Douglas N.,Ph.D.
In the qdec analysis it is hard because we don't really support qdec anymore. You can run the command-line stream, and when you run mri_glmfit-sim to do the clustering, set --cwp 1 to keep all the clusters. At that point you can use mri_segstats with --i sig.mgh and --seg ocn.mgh (where ocn is

[Freesurfer] Mean p-value of uncorrected cluster in Qdec

2019-10-22 Thread Lucia Batzu
External Email - Use Caution Dear Freesurfer Developers, I'm running a Qdec analysis in which I'm looking for correlations between cortical thickness and a continuous CSF measurement. I'm interested in a specific area in which a cluster of correlation pops up, but doesn't survive