Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-12-16 Thread Bronwyn Overs
rt list" Sent: Monday, December 16, 2019 9:20:49 PM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file External Email - Use Caution Hi Bronwyn, you can just add the two betas: it's the slope for the non-case group plus the difference in slo

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-12-16 Thread Diers, Kersten /DZNE
a> | Subscribe<http://www.neura.edu.au/help-research/subscribe> From: "Kersten Diers, DZNE" To: "Freesurfer support list" Sent: Saturday, November 30, 2019 6:50:26 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in clus

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-12-10 Thread Bronwyn Overs
/subscribe | Subscribe ] From: "Kersten Diers, DZNE" To: "Freesurfer support list" Sent: Saturday, November 30, 2019 6:50:26 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file External Email - Use Caution Hi, please see my

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-29 Thread Diers, Kersten /DZNE
ralia> | Facebook<https://www.facebook.com/NeuroscienceResearchAustralia> | Subscribe<http://www.neura.edu.au/help-research/subscribe> ____________________ From: "Greve, Douglas N.,Ph.D." <mailto:dgr...@mgh.harvard.edu> To: "Freesurfer support

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-28 Thread Bronwyn Overs
ibe ] From: "Kersten Diers, DZNE" To: "Bronwyn Overs" Cc: "Freesurfer support list" Sent: Friday, November 29, 2019 8:39:55 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file Hello, and thanks for the explanati

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-28 Thread Diers, Kersten /DZNE
ersten Diers, DZNE" To: "Freesurfer support list" Sent: Thursday, November 28, 2019 12:29:18 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file External Email - Use Caution Hi Bronwyn, Doug, sorry - I missed the other mail fr

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-27 Thread Bronwyn Overs
rt list" Sent: Thursday, November 28, 2019 12:29:18 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file External Email - Use Caution Hi Bronwyn, Doug, sorry - I missed the other mail from two weeks ago (and have been absent for a few days),

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-27 Thread Diers, Kersten /DZNE
Douglas N.,Ph.D." <mailto:dgr...@mgh.harvard.edu> To: "Freesurfer support list" <mailto:freesurfer@nmr.mgh.harvard.edu>, "Kersten Diers, DZNE" <mailto:kersten.di...@dzne.de> Sent: Thursday, November 14, 2019 4:23:12 AM Subject: Re: [Freesurfer] Max threshold marked

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-26 Thread Greve, Douglas N.,Ph.D.
t;Kersten Diers, DZNE" <mailto:kersten.di...@dzne.de> Sent: Thursday, November 14, 2019 4:23:12 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file I'll have to leave this one for Kersten as it appears that the LME stuff is generating and in

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-24 Thread Bronwyn Overs
tp://www.neura.edu.au/help-research/subscribe | Subscribe ] From: "Greve, Douglas N.,Ph.D." To: "Freesurfer support list" , "Kersten Diers, DZNE" Sent: Thursday, November 14, 2019 4:23:12 AM Subject: Re: [Freesurfer] Max threshold marked as '-inf'

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-13 Thread Greve, Douglas N.,Ph.D.
stralia> | Facebook > <https://www.facebook.com/NeuroscienceResearchAustralia> | Subscribe > <http://www.neura.edu.au/help-research/subscribe> > > > > > > *From: *"Greve, Douglas N.

Re: [Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-12 Thread Greve, Douglas N.,Ph.D.
It looks like you have one gigantic cluster with a value of -inf at vertex 41. How did you generate /fsdata/lme/thickness/rh.thickness.B1B7.mgh ? Have you looked at it in freeview? On 11/11/2019 7:39 PM, Bronwyn Overs wrote: External Email - Use Caution Dear Freesurfer Mailing List,

[Freesurfer] Max threshold marked as '-inf' in cluster summary file

2019-11-11 Thread Bronwyn Overs
External Email - Use Caution Dear Freesurfer Mailing List, I have completed an LME analysis in matlab and have generated a number of different cluster summary files for my various contrasts. In many of resulting cluster summary files the 'Max' value for the largest cluster whic