Re: [Freesurfer] Manual editing of segmentation

2012-04-12 Thread Bruce Fischl
Hi Cindy which segmentation? If the aseg, you can start after that. Try running recon-all -s -make all cheers Bruce On Fri, 13 Apr 2012, Cynthia Elisabeth Krafft wrote: > Hello, > > Sorry for a newbie question. If we have to edit the segmentation (and all > that we are interested in investig

[Freesurfer] Manual editing of segmentation

2012-04-12 Thread Cynthia Elisabeth Krafft
Hello, Sorry for a newbie question. If we have to edit the segmentation (and all that we are interested in investigating is the volumetric data), what step should I run after that? Is it necessary to run "recon-all -autorecon2 -autorecon3" or is there some less time-consuming processing that wi