Re: [Freesurfer] MNI CONVERSION PROBLEM

2014-03-27 Thread Gabriel Gonzalez Escamilla
- Mensaje original - De: Douglas N Greve Fecha: Jueves, 27 de Marzo de 2014, 5:54 pm Asunto: Re: [Freesurfer] MNI CONVERSION PROBLEM A: freesurfer@nmr.mgh.harvard.edu > > The first one should be correct. How are you visualizing it? > What is the > command line? > > > O

Re: [Freesurfer] MNI CONVERSION PROBLEM

2014-03-27 Thread Douglas N Greve
ata/standard/MNI152_T1_1mm_brain.nii.gz > --reg > /root/trabajo/freesurfer/subjects/s_001/mri/transforms/reg.mni152.1mm.dat > > > > - Mensaje original - > De: Douglas N Greve > Fecha: Jueves, 27 de Marzo de 2014, 5:54 pm > Asunto: Re: [Freesurfer] MNI CONVERSION PROB

Re: [Freesurfer] MNI CONVERSION PROBLEM

2014-03-27 Thread Douglas N Greve
/subjects/AngelaColesterol_average/mri/orig_in_mni152.mgz > > I also have tried these two commands with the output matrix of > bbregister s001_register.dat > > > > - Mensaje original - > De: Douglas Greve > Fecha: Jueves, 27 de Marzo de 2014, 4:11 am &

Re: [Freesurfer] MNI CONVERSION PROBLEM

2014-03-27 Thread Gabriel Gonzalez Escamilla
Asunto: Re: [Freesurfer] MNI CONVERSION PROBLEM A: freesurfer@nmr.mgh.harvard.edu > > What is your vol2vol command line? > > > On 3/26/14 3:58 PM, Gabriel Gonzalez Escamilla wrote: > Dea

Re: [Freesurfer] MNI CONVERSION PROBLEM

2014-03-26 Thread Douglas Greve
What is your vol2vol command line? On 3/26/14 3:58 PM, Gabriel Gonzalez Escamilla wrote: Dear FS experts, I've been dealing with the conversion to MNI152 of some volumetric labels of my subjects extracted with mris_extract_label in FS v.5.1 but, I've been unable to succeed. I've tried b

[Freesurfer] MNI CONVERSION PROBLEM

2014-03-26 Thread Gabriel Gonzalez Escamilla
Dear FS experts, I've been dealing with the conversion to MNI152 of some volumetric labels of my subjects extracted with mris_extract_label in FS v.5.1 but, I've been unable to succeed. I've tried bbregister and mni152reg commands, both of them give me an example to check at the registration