Re: [Freesurfer] Longitudinal hippocampal subfield registered to base

2017-03-01 Thread Worker, Amanda
behalf of Worker, Amanda Sent: Wednesday, March 1, 2017 12:14:50 PM To: Freesurfer support list Subject: [Freesurfer] Longitudinal hippocampal subfield registered to base Hi All, I have applied the hippocampal subfield segmentation algorithm to each of my time points that have been long

Re: [Freesurfer] Longitudinal hippocampal subfield registered to base

2017-03-01 Thread Iglesias Gonzalez, Eugenio
, Amanda Sent: Wednesday, March 1, 2017 12:14:50 PM To: Freesurfer support list Subject: [Freesurfer] Longitudinal hippocampal subfield registered to base Hi All, I have applied the hippocampal subfield segmentation algorithm to each of my time points that have been longitudinally processed. I am

[Freesurfer] Longitudinal hippocampal subfield registered to base

2017-03-01 Thread Worker, Amanda
Hi All, I have applied the hippocampal subfield segmentation algorithm to each of my time points that have been longitudinally processed. I am now trying to register these back into base space using: mri_convert -T BASE/mri/transforms/TP_to_base.lta -rl BASE/mri/norm.mgz -rt nearest --out_ty