Hi Emad - I believe that it's not finding your freesurfer recons. They
should be under the $SUBJECTS_DIR and have the same names for time points
and longitudinal template as what is under your tracula output directory
(if the latter is different from SUBJECTS_DIR).
Best,
a.y
On Fri, 1 Apr 2
Hi Emad - The error happens at the very beginning, so I'm wondering if
something went wrong in the previous steps, before -path. Can you please
send me the entire trac-all.log of one of your subjects? Thank you!
a.y
On Wed, 30 Mar 2016, Emad Ahmadi wrote:
Hi Anastasia,
I hope you’re enjoy
Hi Anastasia,
I hope you’re enjoying your evening!
I’m doing longitudinal TRACULA analysis on two subjects, each having two time
points. I have already taken the steps of longitudinal recon-all and trac-all
-prep & -bedp.
Now I’m trying to do trac-all -path, but it gives me an error that I can
