Re: [Freesurfer] Longitudinal Freesurfer Analysis

2018-04-16 Thread Martin Reuter
Hi Katie, yes, you should check the base (subject-template) if further editing is necessary there, so that surfaces look good on the base. Best, Martin > On 4. Apr 2018, at 15:54, Mckay, Katie Geraldine > wrote: > > Hi, > I have a question regarding the longitudinal processing stream in Free

[Freesurfer] Longitudinal Freesurfer Analysis

2018-04-04 Thread Mckay, Katie Geraldine
Hi, I have a question regarding the longitudinal processing stream in FreeSurfer, is it possible to use the processing stream if both baseline and endline data have already been edited with control points? Thanks! Katie McKay ___ Freesurfer mailing

Re: [Freesurfer] Longitudinal freesurfer analysis question

2013-11-11 Thread Martin Reuter
Hi Salil, of course you can compare values like you say. Why shouldn't you? The longitudinal stream is used to increase reliability of reported measures if you have 2 or more images from the same subjects. Best Martin On 11/11/2013 12:00 PM, Salil Soman wrote: Thank you Martin. Just to cla

Re: [Freesurfer] Longitudinal freesurfer analysis question

2013-11-11 Thread Salil Soman
Thank you Martin. Just to clarify, then it is not valid to compare values of single point analyses (e.g. hippocampal volume from freesurfer analysis of time point 1 subtracted from hippocampal volume of from freesurfer analysis of time point 2). Best wishes, -Salil On Mon, Nov 11, 2013 at 7:58

Re: [Freesurfer] Longitudinal freesurfer analysis question

2013-11-11 Thread Martin Reuter
Hi Salil, please send questions to the free surfer mailing list. If you used the longitudinal stream for processing the etiv should be the same in all time points. It is computed in the 'base' = within subject template once for the entire series. It seems that you did not run your images throug