[Freesurfer] Issue with Talairach - mritotal

2015-11-18 Thread Amlung, Michael
We are getting an error with recon-all at the stage of Talairach slignment. The error is the one described on the known issues: Can't locate shellwords.pl in @INC. We are running perl5.18, so I downloaded and installed perl5.12 and changed the first line of mritotal as indicated on the ReleaseNo

[Freesurfer] Issue with Talairach - mritotal

2015-11-16 Thread Amlung, Michael
We are getting an error with recon-all at the stage of Talairach slignment. The error is the one described on the known issues: Can't locate shellwords.pl in @INC. We are running perl5.18, so I downloaded and installed perl5.12 and changed the first line of mritotal as indicated on the ReleaseN