Hi Doug
I've tried it and the surface is still not aligned with the diffusion image.
The visualization is done using FREEVIEW.
Thanks again!
Shani
On Fri, Feb 1, 2013 at 9:19 PM, Douglas N Greve
wrote:
> Hi Shani, I don't know anything about that program and can't vouch for it
> (which probably
Hi Shani, I don't know anything about that program and can't vouch for
it (which probably means that I wrote it:). Anyway, the way that I would
do it would be to compute a new matrix:
K = M*inv(T)*R
where R is the register.dat and T is the vox2tkrRAS and M is the
vox2scannerRAS of the DTI. Thes
Hi Doug
I'm sorry it's fs_read_regdat.m a matlab script I found in the mail archive
which converts the register.dat file into ras2ras transformation matrix.I
want to use thess surfaces to extract vector normals in the diffusion space.
Hope it's clear now
Thanks!
Shani
On Thu, Jan 31, 2013 at 10:3
Hi Shani, what is fs_read_dat.m? I've never seen it before. Why do you
need to transform the surface? What are you using to create the display
below (ie, command line)?
doug
On 01/31/2013 10:53 AM, Shani Ben Amitay wrote:
> Dear freesurfers
> I used bbregister to coregister diffusion images with
