Re: [Freesurfer] How to convert a thickness file (i.e. lh.thickness) ti a 3D nifti file

2013-09-18 Thread Bruce Fischl
Hi Fabrice, what would converting a thickness file (which has one value for each point on the surface) to a volume mean? Would you want just a strand of voxels with the thickness values at the gray/white boundary? At the pial surface? Would you want the ribbon filled with the same value? If you

[Freesurfer] How to convert a thickness file (i.e. lh.thickness) ti a 3D nifti file

2013-09-18 Thread Fabrice Crivello
Dear Freesurfer users, I am searching how to use the mri_surf2vol command in order to convert a "lh.thickness" file into a 3D .nii file (in the original subject space). Many Thanks, Fabrice ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu