Re: [Freesurfer] Help: error on running dt_recon

2015-02-11 Thread Douglas Greve
Just give it one of the dicoms (ie, don't use the "*" wild card, just give it the actual file name of one of the files in the series, it will find the rest) doug On 2/11/15 4:28 PM, Sampada Sinha wrote: Dear freesurfer experts, Sorry for posting such a long message but I am trying to run dt

[Freesurfer] Help: error on running dt_recon

2015-02-11 Thread Sampada Sinha
Dear freesurfer experts,Sorry for posting such a long message but I am trying to run dt_recon command on DTI images acquired in dicom format using 3T_Toshiba (Toshiba_MEC_MR3). Image parameters are: Scanning sequence =Spin Echo; TR=9 ; TE=082.0 ; Flip angle = 90; Slice thickness= 3.; acquisitio