Re: [Freesurfer] Guidance on SegmentHA with Low-Res MRI

on SegmentHA with Low-Res MRI Dear FreeSurfer Community, I’m currently working with clinical MRI data and would appreciate your guidance regarding two issues I'm encountering with hippocampal/amygdala segmentation (segmentHA_T1.sh script). My available T1w and T2w scans both have 6 mm

[Freesurfer] Guidance on SegmentHA with Low-Res MRI

Dear FreeSurfer Community, I’m currently working with clinical MRI data and would appreciate your guidance regarding two issues I'm encountering with hippocampal/amygdala segmentation (segmentHA_T1.sh script). My available T1w and T2w scans both have 6 mm slice thickness and are anisotropic and