Re: [Freesurfer] Group analysis, contrasts

2011-01-10 Thread Douglas N Greve
Both of those contrasts will give you the same p-value. The difference is if you look at the contrast values themselves (gamma.nii). The first contrast will give you values in units of mm. The second will give you values in units of 4*mm. doug Per Selnes wrote: > I'm trying to set ut a freesur

[Freesurfer] Group analysis, contrasts

2011-01-10 Thread Per Selnes
I'm trying to set ut a freesurfer group analysis. In my fsgd file there are four groups/classes and 2 variables, like so: GroupDescriptorFile 1 Title Class Class1 Class Class2 Class Class3 Class Class4 SomeTag Variables Variable1 Variable2 Input subj1 Class1 49 1 Input subj2 Clas