Hi Sophie
what kind of modifications did you make? The 3 volumes are part of the
information in the gca, but not all of it (they don't contain the markov
information) so there is no way to recreate it from only them. mri_ca_train
is the only way to make a gca at the moment, although there is s
Dear experts,
I extracted the 3 mgz volumes of the GCA file used in the recon-all process
(RB_all_2008-03-26.gca). I modified these files and I wanted to recreate the
GCA file by reunite the 3 mgz. I tried some mri_convert command but I failed to
convert these 3 volumes in 1 GCA file. Is it pos
1. These need to be image volumes with every voxel containing an index
into FreeSurferColorLUT.txt
2. Use the volumes from 1.
3. Yes.
4. The aseg is used to automated several steps in cortical surface
reconning that you will need to do manually if you don't have one
(ventricle/thalamus/basal
Hello, I have a few questions that I hope can be answered:
Q1:How can '.label' files be turned into the necessary '.gca' file needed for
the recon-all pipeline. Starting for the first step in auto-recon2.What else
other than the '.label' files would be needed to create this '.gca' file?
Q2: How
I got some question about gca file format.
What does totaltraining means?
GIBBS_NEIGHBORS is more 6 neighboring voxels. What is relationship between
them? From 1:6 , which one is left, right etc?
thanks
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