[Freesurfer] Fwd: Freeview 'quit unexpectedly' before opening

2023-02-08 Thread Rankin McGugin
External Email - Use Caution Here is my error log: Last login: Wed Feb 8 12:03:23 on ttys000 Rankins-MacBook-Pro:~ rankinmcgugin$ export FREESURFER_HOME=/Applications/freesurfer/7.3.2 Rankins-MacBook-Pro:~ rankinmcgugin$ source $FREESURFER_HOME/SetUpFreeSurfer.sh free

Re: [Freesurfer] Fwd: Freeview

2019-07-16 Thread fsbuild
External Email - Use Caution See if you have the following directory with the plugins libraries, $ ls /usr/lib/x86_64-linux-gnu/qt5/plugins/platforms There should be a libqxcb.so listed in that directory if you have them. Also try setting the following in your environment $ export

[Freesurfer] Fwd: Freeview

2019-07-16 Thread Juan Rivas
External Email - Use Caution Hello, I am working with Ubuntu 18. I did what you asked to me, but the results are the same: *jcrn12@jcrn12-VirtualBox:~$ sudo apt-get install qt5-default qtcreatorReading package lists... DoneBuilding dependency tree Reading state

[Freesurfer] Fwd: freeview

2019-07-16 Thread Juan Rivas
External Email - Use Caution Have you found any solution? Is it possible to bring my computer to you as a way to solve the problem under your supervision? Thanks a lot. JC. -- Forwarded message - De: Juan Rivas Date: vie., 12 jul. 2019 a las 10:50 Subject: freeview

[Freesurfer] Fwd: freeview

2019-07-15 Thread Juan Rivas
External Email - Use Caution libgfortran.so.3. No found. I día the fortran step as you indicated yo me. Thanks again, JC. -- Mensaje reenviado - De: fsbuild Fecha: El lun, 15 de jul. de 2019 a las 17:09 Asunto: Re: [Freesurfer] freeview Para: Cc: Did you try,

[Freesurfer] Fwd: freeview

2019-07-15 Thread Juan Rivas
External Email - Use Caution It looks like freeview is in: jcrn12@jcrn12-VirtualBox:~$ /usr/local/freesurfer/bin/freeview But when I try to use it, I can not do it, because: jcrn12@jcrn12-VirtualBox:~$ ldd freeview | grep not ldd: ./freeview: No such file or directory. Thank you fo

Re: [Freesurfer] Fwd: Freeview

2019-07-15 Thread fsbuild
External Email - Use Caution Sorry - from your previous mail, I mistakenly thought “which freeview” returned /usr/local/bin/freeview. If you can reproduce what you did before to run freeview from the command line where it tells you that it was not finding libgfortran, then “which

[Freesurfer] Fwd: Freeview

2019-07-15 Thread Juan Rivas
External Email - Use Caution That is what happened: $ ldd /usr/local/bin/freeview | grep not ldd: /usr/local/bin/freeview: No such file or directory $ bash jcrn12@jcrn12-VirtualBox:~$ ldd /usr/local/bin/freeview | grep not ldd: /usr/local/bin/freeview: No such file or directory JC.

Re: [Freesurfer] Fwd: Freeview update on Mac

2018-02-28 Thread Ruopeng Wang
Hi Sarah, Drawing an ROI on a surface is a little bit complicated. You will need to have a surface and volume loaded first. Then you create or load a ROI as a volume ROI. On the control panel, there should be a "Map to surface" option, you can map the ROI to the loaded surface. Then you shoul

[Freesurfer] Fwd: Freeview update on Mac

2018-02-28 Thread Sarah Cole
Great! Thank you so much, Andrew. I downloaded the updated Freeview. I am still wondering how to draw an ROI on the surface in Freeview. I don't have the options. Could you please let me know what command you are running to get the Freeview? I am having the updated version Jan 2018. Thanks, Sara

Re: [Freesurfer] Fwd: freeview error

2013-12-31 Thread Rujing Zha
. 2014-01-01 Rujing Zha 发件人:Ruopeng Wang 发送时间:2014-01-01 00:16 主题:Re: [Freesurfer] Fwd: freeview error 收件人:"rujing cha" 抄送:"charujing123","freesurfer" Hi Rujing, Your hardware setup does sound a bit insufficient to run freeview smoothly. But I don't

Re: [Freesurfer] Fwd: freeview error

2013-12-31 Thread Ruopeng Wang
Hi Rujing, Your hardware setup does sound a bit insufficient to run freeview smoothly. But I don't think that is the reason "configure overlay" hangs. Would it be possible to send us the files used in your command? Best, Ruopeng On Dec 31, 2013, at 1:04 AM, rujing cha wrote: > Hi Bruce and

[Freesurfer] Fwd: freeview error

2013-12-30 Thread rujing cha
Hi Bruce and others, Thanks Bruce. I had installed the centos6.5 x86_64 in my computer, and setup the freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0.tar.gz, and I setup the nvidia drivers completely. Then I tried to run this command: freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:overlay=

[Freesurfer] Fwd: Freeview display errors - Ubuntu 12.04

2012-09-17 Thread Richard Binney
-- Forwarded message -- From: Richard Binney Date: Thu, Sep 13, 2012 at 2:01 PM Subject: Freeview display errors - Ubuntu 12.04 To: freesurfer@nmr.mgh.harvard.edu Hi Freesurfers, I've recently moved onto Ubuntu 12.04. The Freesurfer installation has required me to download vario