Re: [Freesurfer] Fwd: Re: repeat: trouble loading nifti files

2013-05-07 Thread Bruce Fischl
Hi Akshay the -cs flag specifies the voxel size, not the field of view, so you are creating a volume with 256mm voxels! Try --cw256 instead. cheers Bruce On Tue, 7 May 2013, Akshay wrote: > > mri_convert path-to-nifti file mask.mgz --resample_type nearest -cs 256 > > On 5/7/13 2:55 PM, Bruce F

[Freesurfer] Fwd: Re: repeat: trouble loading nifti files

2013-05-07 Thread Akshay
mri_convert path-to-nifti file mask.mgz --resample_type nearest -cs 256 On 5/7/13 2:55 PM, Bruce Fischl wrote: > can you send me the full mri_convert command line that is run? > On Tue, 7 May 2013, Akshay wrote: > >> Hi Bruce >> >> Please find the file attached >> >> Best, >> >> Akshay >> >> >> O