Re: [Freesurfer] Fwd: FindFacePath

2008-09-16 Thread Bruce Fischl
Hi Joost, did you try the old one (mris_fix_topology)? Sounds like it failed finding a non-separating loop. What does the unfixed (?h.orig) surface look like? Is something dramatically wrong with it? cheers, Bruce On Tue, 16 Sep 2008, j janssen wrote: Hi, after a bit more digging i´ve co

[Freesurfer] Fwd: FindFacePath

2008-09-16 Thread j janssen
Hi, after a bit more digging i´ve concluded that the orginal topology fixer (mris_fix_topology) failed because: mris_euler_number ../surf/lh.orig gave (euler number != 2) therefore it tries: mris_topo_fixer -mgz -warnings "subjid" lh which runs for some time and then exits: ERROR: _FindFacePat