Re: [Freesurfer] Fwd: A question about recon-all

2011-11-08 Thread Douglas N Greve
Or you can delete the IsRunning file in the scripts directory (make sure it's not actually running!). doug Bruce Fischl wrote: > Hi Nooshin, > > you can jsut add -no-isrunning to the command line if you are sure the > process has finished. This happens when it was killed in a strange way > (i.e

Re: [Freesurfer] Fwd: A question about recon-all

2011-11-08 Thread Bruce Fischl
Hi Nooshin, you can jsut add -no-isrunning to the command line if you are sure the process has finished. This happens when it was killed in a strange way (i.e. if you hit ctrl-c during processing) cheers Bruce On Tue, 8 Nov 2011, nooshin n.zade wrote: Dear Freesurfer Group I have found

[Freesurfer] Fwd: A question about recon-all

2011-11-08 Thread nooshin n.zade
Dear Freesurfer Group I have found a problem in running my subjects. With "recon-all -autorecon1 -autorecon2 -autorecon3 -subjid N?" I ran several subjects after making corrections, but suddenly I received error message as following, and I can not run rest of the subjects. It is saying the subject