The --etiv-only option only prints it to the screen and does not create
a summary file. The ICV is present in the aseg.stats file and should be
present when you run asegstats2table.
If you want to get the single ICV number in a file, you can run
mri_segstats --subject $(filename) --etiv-only |
Dear Freesurfers,
I have a problem using the "mri_segstats" function. I'm trying to get Intra
cranial volumes (ICV) from images that I have previously segmented. As I
have lots of images, I'm using this script :
"
foreach filename (*_conv)
mri_segstats --subject $(filename) --etiv-only --sum summ