Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-16 Thread Daniel Cole
Hey Doug, Sorry I did miss your response last time, thank you for the advice. I tried running the analysis again and this time it did create the angle file. However, now I'm running into a different problem. I can get the angle map to show up on the surface of my subject's brain but I can't get

Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-16 Thread Daniel Cole
Hello again, Don't mean to be a bother. I was wondering if anyone had any thoughts on what possibly be going wrong during my retinotopic analysis that I posted. I'm at quite a loss and would appreciate a look. Thanks and best, Daniel On Fri, May 11, 2012 at 11:49 AM, Daniel Cole wrote: > Hello

Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-11 Thread Douglas N Greve
Hi Daniel, answers below doug On 05/11/2012 11:49 AM, Daniel Cole wrote: > Hello, > I have some questions regarding the FsFastIndividual pipeline. I hope > you can take a look at the commands I have run and give me some > insight into what the problem might potentially be. I have 5 rotating >

[Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-11 Thread Daniel Cole
Hello, I have some questions regarding the FsFastIndividual pipeline. I hope you can take a look at the commands I have run and give me some insight into what the problem might potentially be. I have 5 rotating wedge stimuli runs 1. I set up my subject's directories according to the freesurfer t