Re: [Freesurfer] Freeview chrash

2012-05-20 Thread Focke, Niels
Nachricht- Von: Ruopeng Wang [mailto:rpw...@nmr.mgh.harvard.edu] Gesendet: Mittwoch, 16. Mai 2012 18:30 An: Focke, Niels Betreff: Re: AW: [Freesurfer] Freeview chrash Hi Niels, Are you using non-English terminals? I think we found the reason. But no fix yet. The work around is to set your

Re: [Freesurfer] Freeview chrash

2012-05-03 Thread Ruopeng Wang
This is too strange. I logged into the same machine. Both stable and dev version load the surface file without any problem... We will investigate. Ruopeng On 05/03/2012 12:12 PM, Alexandre Gramfort wrote: >> Alex, since you're in the Martinos center, can you try source the dev >> version just to

Re: [Freesurfer] Freeview chrash

2012-05-03 Thread Alexandre Gramfort
> Alex, since you're in the Martinos center, can you try source the dev > version just to see if the same problem exists? I just tried after sourcing /usr/local/freesurfer/nmr-dev-env and got the same segfault with MatrixMultiply: m2 is null! I tried on the machine: megmix Alex

Re: [Freesurfer] Freeview chrash

2012-05-03 Thread Focke, Niels
iels Focke Klinische Neurophysiologie UMG - Universitätsmedizin Göttingen -Ursprüngliche Nachricht- Von: Ruopeng Wang [mailto:rpw...@nmr.mgh.harvard.edu] Gesendet: Donnerstag, 3. Mai 2012 14:42 An: Alexandre Gramfort Cc: freesurfer@nmr.mgh.harvard.edu; Focke, Niels Betreff: Re: [Freesurfer] Freev

Re: [Freesurfer] Freeview chrash

2012-05-03 Thread Ruopeng Wang
Strange. I could not reproduce the error. Niels, I also tried the surface file you sent me. It loads fine. My colleague could not reproduce it on his machine, either. Alex, since you're in the Martinos center, can you try source the dev version just to see if the same problem exists? Thanks, R

Re: [Freesurfer] Freeview chrash

2012-05-03 Thread Alexandre Gramfort
Dear Ruopeng, to reproduce the problem with : MatrixMultiply: m2 is null! and the seg fault. $source /usr/local/freesurfer/nmr-stable51-env $cd ~gramfort/cluster/work/data/MNE-sample-data/subjects $setenv SUBJECTS_DIR $PWD $freeview -f sample/surf/lh.inflated if you cannot access this folder yo

Re: [Freesurfer] Freeview chrash

2012-05-02 Thread Focke, Niels
Dear Ruopeng, this happens with any surface, for example "bert" lh/rh.pial (that comes with Freesurfer). I have attached a locally generated surface as well, but I would guess that the problem is not the surface (files) but rather freeview itself or an incompatibility maybe with the Centos 5 libra

Re: [Freesurfer] Freeview chrash

2012-05-02 Thread Ruopeng Wang
Would it be possible to send us the surface file that caused the crash? So that we can replicate the problem? Thanks, Ruopeng On 5/2/12 9:35 AM, Focke, Niels wrote: > Dear experts, > > I have experienced some problems with freeview. When loading a surface (both > for my locally generated surface

[Freesurfer] Freeview chrash

2012-05-02 Thread Focke, Niels
Dear experts, I have experienced some problems with freeview. When loading a surface (both for my locally generated surfaces as well as for "bert" surfaces) the program exits (progress bar at approx. 10%) with this message: MatrixMultiply: m2 is null! The problem happens both for command line lo