Re: [Freesurfer] Freesurfer Template Creation

2017-06-20 Thread Martin Reuter
Hi Daniele, as others commented, the stream is unbiased so the order does not affect results, so you are fine. That said, if you switch the order around you will get slightly different results due to numerical reasons (small differences affected by the order that accumulate to produce noticeab

Re: [Freesurfer] Freesurfer Template Creation

2017-06-20 Thread Bruce Fischl
no, the longitudinal anlaysis is be design insensitive (and unbiased!) w.r.t. the order of the timepoints cheers Bruce On Tue, 20 Jun 2017, Daniele Orlandi wrote: Dear experts, any suggestion about my question? (see below) Thank you in advance! Daniele \- Messaggio originale - \Da

Re: [Freesurfer] Freesurfer Template Creation

2017-06-20 Thread Yendiki, Anastasia
...@nmr.mgh.harvard.edu] on behalf of Daniele Orlandi [dorla...@fatebenefratelli.eu] Sent: Tuesday, June 20, 2017 7:07 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Freesurfer Template Creation Dear experts, any suggestion about my question? (see below) Thank you in advance! Daniele

Re: [Freesurfer] Freesurfer Template Creation

2017-06-20 Thread Daniele Orlandi
Dear experts, any suggestion about my question? (see below) Thank you in advance! Daniele \- Messaggio originale - \Da: "Daniele Orlandi" \A: freesurfer@nmr.mgh.harvard.edu \Inviato: Venerdì, 16 giugno 2017 18:01:59 \Oggetto: Freesurfer Template Creation \ \Dear experts, \ \I'm runnin

[Freesurfer] Freesurfer Template Creation

2017-06-16 Thread Daniele Orlandi
Dear experts, I'm running the Fresurfer Longitudinal Stream and I didn't realize that creating the Template file, some time points were not in the right order: recon-all -base -tp -tp -tp -tp -all instead of: recon-all -base -tp -tp -tp -tp -all Does it affect the creation of