subject:"\[Freesurfer\] Freesurfer FSL Dimensions"

Re: [Freesurfer] Freesurfer FSL Dimensions

2009-07-01 Thread Douglas N Greve

Try mri_vol2vol --interp nearest --mov aparc+aseg.mgz --regheader --targ rawavg.mgz --o aparc+aseg.native.nii.gz Natalia Sanchez wrote: Hi: I am using Freesurfer and FSL together. My image dimensions initially are 256x256x128 in nii.gz format. I convert these images to .mgz using mri_

[Freesurfer] Freesurfer FSL Dimensions

2009-07-01 Thread Natalia Sanchez

Hi: I am using Freesurfer and FSL together. My image dimensions initially are 256x256x128 in nii.gz format. I convert these images to .mgz using mri_convert and do cortical and subcoritcal segmentation in FreeSurfer. The outputs of the segmentation are the converted back into .nii.gz so I can use t