Hi Lauri
I think you forgot to attach the logs
Bruce
On Thu, 10 Dec 2015, Tuominen, Lauri Johannes wrote:
Dear Freesurfer experts,
I ran recon-all on launchpad using
/usr/local/freesurfer/stable6/bin/recon-all. This command worked nicely, but
part of the occipital cortex was missing and I t
Dear Freesurfer experts,
I ran recon-all on launchpad using /usr/local/freesurfer/stable6/bin/recon-all.
This command worked nicely, but part of the occipital cortex was missing and I
therefore ran the following command ( both in freesurfer6 ):
recon-all -skullstrip -wsthresh 35 -clean-bm -no
