Have you tried changing the window levels (contrast and brightness)?
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Wighton, Paul
Sent: Friday, September 30, 2022 10:17 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
Hi
luck!
-Paul
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Justina Lee
Sent: Friday, September 30, 2022 10:25 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Ca
-boun...@nmr.mgh.harvard.edu
on behalf of Justina Lee
Sent: Friday, September 30, 2022 5:36 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Caution
Hi Paul,
Redownloading freesurfer seems to have done the trick,
eesurfer-boun...@nmr.mgh.harvard.edu <
>> freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Wighton, Paul <
>> pwigh...@mgh.harvard.edu>
>> *Sent:* Thursday, September 15, 2022 9:56 AM
>> *To:* Freesurfer support list
>> *Subject:* Re: [Freesurfer] Freesurfe
l <
> pwigh...@mgh.harvard.edu>
> *Sent:* Thursday, September 15, 2022 9:56 AM
> *To:* Freesurfer support list
> *Subject:* Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not
> found
>
> Hi Justina,
>
> Ok so on your computer, the subjects are located
-Paul
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Wighton, Paul
Sent: Thursday, September 15, 2022 9:56 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
Hi Justina,
Ok so on your computer, the subjects are locat
__
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Justina Lee
Sent: Thursday, September 15, 2022 7:51 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Caution
Hi Paul,
Thank you for your he
urfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Caution
Hi Paul,
This seems to have done the trick. Thank you for guiding me through this
process, I really appreciate all your help.
My last question refers to this comment when trying to run the segmentHA_
; on behalf of Justina Lee <
> justinale...@gmail.com>
> *Sent:* Tuesday, September 13, 2022 2:57 PM
> *To:* Freesurfer support list
> *Subject:* Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not
> found
>
>
> External Email - Use Caution
>
> H
OME=$FREESURFER_HOME ./fs_install_mcr R2019b
-Paul
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Justina Lee
Sent: Tuesday, September 13, 2022 2:57 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unz
l
> --
> *From:* freesurfer-boun...@nmr.mgh.harvard.edu <
> freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Justina Lee <
> justinale...@gmail.com>
> *Sent:* Tuesday, September 13, 2022 2:37 PM
> *To:* Freesurfer support list
27;
environment, because the install script relies on that.
-Paul
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Justina Lee
Sent: Tuesday, September 13, 2022 2:37 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr
harvard.edu <
> freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Justina Lee <
> justinale...@gmail.com>
> *Sent:* Tuesday, September 13, 2022 1:58 PM
> *To:* Freesurfer support list
> *Subject:* Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not
> fou
, September 13, 2022 2:28 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Caution
Hi Paul,
When I try to run the installation command with sudo, the following error
command shows:
sudo: fs_install_mcr
:* Tuesday, September 13, 2022 1:58 PM
> *To:* Freesurfer support list
> *Subject:* Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not
> found
>
>
> External Email - Use Caution
>
> Thank you Paul for your help!
>
>
> This seems to have solved the iss
ry?
-Paul
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Justina Lee
Sent: Tuesday, September 13, 2022 1:58 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Caution
mr.mgh.harvard.edu> on behalf of You Na Lee <
> justinale...@gmail.com>
> *Sent:* Tuesday, September 13, 2022 9:01 AM
> *To:* freesurfer@nmr.mgh.harvard.edu
> *Subject:* [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not
> found
>
>
> External
ehalf of You Na Lee
Sent: Tuesday, September 13, 2022 9:01 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
External Email - Use Caution
To whom it may concern,
Apologies for my first post, I was a little bit confounded
External Email - Use CautionTo whom it may concern, Apologies for my first post, I was a little bit confounded as to how I can reach for help. I would like to use the segmentation of hippocampal subfields and the nuclei of the amygdala. Currently, I am working with Ubuntu on windows
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