Hi Kaley,
the problem is,, when you re-run the base with different images, it will create
the median image at a different location. That means that all your edits will
be at the wrong location. I currently don’t see a way to fix this easily
without a lot of tweaking of the recon-all script. On
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Dear FreeSurfer Developers,
I posted this question last week, but did not receive a response. Please let me
know if I can provide any additional information.
We are using your longitudinal processing pipeline (version 6.0) for our study
(n=140, 3 ti
