[Freesurfer] Fixing Bad Output From the Talairach Registration

2012-02-15 Thread Miguel Ferreira
Hello freesurfer group, I'm having trouble in the fixing bad output from the talairach registration step. When I click on the "Save Reg" button to save a transformation that I make the console just hangs on this message "UnZeroing CRAS for fstal output xfm". Anyone have any ideia what the problem

Re: [Freesurfer] Fixing Bad Output From the Talairach Registration

2008-06-11 Thread Bruce Fischl
Hi Giovonni, it stopped after detecting an unlikely transform, so no surfaces were created. You could run recon-all -s patient_lyp -all -notal-check which will skip the checking of the talairach xform, but if it is really wrong then things may feel. You can still use tkregister2 to do the

[Freesurfer] Fixing Bad Output From the Talairach Registration

2008-06-11 Thread skgtgac
Hi, my name is giovanni, hope you can help me... i started the command recon-all -s patient_lyp -all on a folder containing the data of one of my patients... after few minutes I got this error message: ### Thu Jun 5 08: