You should be able to do it that way. When you run mkanalysis, specify
-funcstem fmcpr.sm0.fsaverage.lh.nii.gz, and then selxavg3-sess will
then use that file as input. If you want to smooth, then do that
explicitly and pass the smoothed file to mkanalysis
On 04/06/2017 12:35 PM, Christopher M
Hi list,
We're working on making a preprocessing stream that will be generally
accessible to different analysis streams, including FreeSurfer. One
component of this is sampling functional volumes to FreeSurfer meshes, and
I want to test this component by running a simple first-level GLM in
FreeSur
