Re: [Freesurfer] FSGD File Formatting Error

2015-11-27 Thread Douglas Greve
looks like you created the fsgd file under windows? There are a bunch of carriage returns (look like ^M in the file). Try using a simple text editor under linux. On 11/27/15 2:32 PM, Shady El Damaty wrote: Hi Freesurfers, I'm having some issues running mri_glmfit using a simple custom GLM

[Freesurfer] FSGD File Formatting Error

2015-11-27 Thread Shady El Damaty
Hi Freesurfers, I'm having some issues running mri_glmfit using a simple custom GLM file. I've double checked to make sure the subject session file passed to isxconcat-sess is the same as the fsgd file and also checked the formatting corresponds with what is posted online however I keep getting th