External Email - Use Caution
The problem seems to have been resolved. I began today's session by
defining freesurfer home and sourcing the setup script, as suggested. I
then re-defined the subjects directory and then ran recon-all -i
sample-001.nii.gz -s bert -all. Everything seems
can you send the command line and full terminal output? Also, when you run it
again, put -debug as the first argument. It will create a huge amount of
terminal output, but it will be helpful for diagnosing the problem
On 6/2/2019 3:57 AM, Kavinash Loganathan wrote:
External Email - Use
External Email - Use Caution
Dear freesurfer, I am following the installation test as suggested (
http://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall/) and am
currently stuck at example 2. When I ran recon-all, I got the output: "if:
missing file name".
I noticed this has
