Re: [Freesurfer] Extract Cortical Thickness Values from ROI.nii

2018-08-23 Thread Bruce Fischl
Hi Dave if recon-all is done it will produce two files named lh.thickness and rh.thickness, which are scalar maps with a thickness value at each vertex cheers Bruce On Thu, 23 Aug 2018, Davide Momi wrote: External Email - Use Caution Dear all,  I've just completed the re

[Freesurfer] Extract Cortical Thickness Values from ROI.nii

2018-08-23 Thread Davide Momi
External Email - Use Caution Dear all, I've just completed the recon -all command and I would like to extract Cortical thickness values in subject space at vertex level (without any sort of normalization). Could you please give me an insight on how to do it? Thanks in advance D