I have done the changes did you suggested:
mkanalysis-sess -analysis fc.rhipposeed.mni305 -mni305 -fwhm 6 -notask -taskreg
R_Hippocampus.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5 -polyfit 5 -nskip 4
-mcextreg -fsd rest -TR 3 -per-run -hpf 0.01 -lpf 0.1 -force
but the error persists:
GLS B
You need to swap the values of the hpf and lpf. The way you have it,
you are essentially filtering out everything above .01 Hz, which
probably leaves almost no signal
On 1/3/18 3:00 PM, std...@virgilio.it wrote:
mkanalysis-sess -analysis fc.lhamgseed.surf.lh -surface fsaverage lh
-fwhm 6 -
mkanalysis-sess -analysis fc.lhamgseed.surf.lh -surface fsaverage lh -fwhm 6
-notask -taskreg L_Amygdala.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5
-polyfit 5 -nskip 4 -mcextreg -fsd rest -TR 3 -per-run -hpf 0.1 -lpf 0.01
Thanks
> Il 31 dicembre 2017 alle 22.34 Douglas Greve ha
> scritto:
>
mkanalysis-sess -analysis fc.lhamgseed.surf.lh -surface fsaverage lh -fwhm 6
-notask -taskreg L_Amygdala.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5
-polyfit 5 -nskip 4 -mcextreg -fsd rest -TR 3 -per-run -hpf 0.1 -lpf 0.01
> Il 1 gennaio 2018 alle 18.49 Douglas Greve ha
> scritto:
>
>
>
I meant your mkanalysis-sess command, not your selxavg3-sess command
On 1/1/18 12:36 PM, std...@virgilio.it wrote:
selxavg3-sess -sf sessid -a fc.rhamgseed.surf.rh
I have already used this command line many times, previously, using
other labels.
It has always worked well.
I wonder if that e
selxavg3-sess -sf sessid -a fc.rhamgseed.surf.rh
I have already used this command line many times, previously, using other
labels.
It has always worked well.
I wonder if that error could be come from the update of my computer by macOS 1.
Thanks
Stefano
> Il 31 dicembre 2017 alle 22.34 Douglas
What is your mkanalysis-sess command line?
On 12/28/17 8:53 AM, std...@virgilio.it wrote:
Running the "selxavg3-sess -s" command line in FS-FAST for seed-based
functional connectivity analysis
the following errors occurred:
--
Temporally filtering
Error using chol
Running the "selxavg3-sess -s" command line in FS-FAST for seed-based
functional connectivity analysis
the following errors occurred:
--
Temporally filtering
Error using chol
Matrix must be positive definite.
Error in fast_selxavg3b (line 947)
Wseg = inv(chol(toeplit
