Hi Melina
Sorry for the delay in responindg, can you tell us a bit more about the
acquisition? They look very grainy and low contrast.
Bruce
On Mon, 16 Feb 2015, Melina Lehnerer wrote:
> Thank you both for your respond.
> 1. I have attached you some pictures. Like douglas wrote it corresponds
Yes, that is normal
On 2/16/15 11:42 AM, Melina Lehnerer wrote:
Thank you both for your respond.
1. I have attached you some pictures. Like douglas wrote it
corresponds to white matter in aseg, but is more often labelled as
"none" than "cortex unknown". So is this "normal" and can I trust
tho
On 2/16/15 9:31 AM, Bruce Fischl wrote:
> Hi Melina
>
> 1. Can you send us a picture? I'm not sure given your description,
> although the surfaces can be arbitrary in the hippocampus/amygdala and
> should be ignored there.
This corresponds to the "cortex unknown" label in aparc (and is
probably
Hi Melina
1. Can you send us a picture? I'm not sure given your description,
although the surfaces can be arbitrary in the hippocampus/amygdala and
should be ignored there.
2. You should be able to use mri_label2vol for this. Note that you can load
the label itself directly into freeview if yo
Hi experts,
I'm rather unexperienced with freesurfer so please excuse my basic
requests.
1. I controlled the segmentation of the entorhinal cortex (EC) in over
50 subjects following the borders described in Fischl 2009 (Predicting
the location of EC from MRI) with tkmedit [mri name] brainmask.mg
