Hi Marina,
If you meant to set threshold for surface overlay from the command-line, you
can do it like this:
freeview -f lh.inflated:overlay=overlay_file:overlay_threshold=min,max
For more overlay options, you can run ‘freeview -h’ and look under ‘-f,
--surface’ section.
Best,
Ruopeng
On Oct
Not sure. Ruopeng (cc'ed) can comment on the control of the color bar
On 10/20/2020 5:05 AM, Marina Fernández wrote:
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Thanks for the reply Doug,
We used the tksurfer command lines because they were run in matlab
after performing some analysis to obtain the
External Email - Use Caution
Thanks for the reply Doug,
We used the tksurfer command lines because they were run in matlab after
performing some analysis to obtain the figures of the results. With the
scripts, these figures are automatically saved for later review. We would
like t
Not sure, we don't use tksurfer that much anymore. Have you tried
freeview? You can run freeview with tksurferfv and the same tksurfer
arguments (makes it easier)
On 10/13/2020 5:03 AM, Marina Fernández wrote:
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Dear Freesurfer experts,
I would like to mod
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Dear Freesurfer experts,
I would like to modify the values of the colorbar scale to display results
in the inflated surface with tksurfer, in such a way that displayed values
in the colorbar range from the minimum t- value detected to the maximum t
val
