fsaverage_sym.
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Asa Borzabadi Farahani
Sent: Wednesday, February 8, 2023 4:12 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Directory
External Email - Use Caution
Hi Yujing, thanks for your response
Yes my
986>
for Windows
From: Huang, Yujing<mailto:yhuan...@mgh.harvard.edu>
Sent: February 8, 2023 11:41 AM
To: Freesurfer support list<mailto:freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Directory
I think you can try to use mris_register directly.
https://se
I think you can try to use mris_register directly.
https://surfer.nmr.mgh.harvard.edu/fswiki/mris_register
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Huang, Yujing
Sent: Wednesday, February 8, 2023 11:05 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Directory
Hi
y, February 8, 2023 10:38 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Directory
External Email - Use Caution
Hi there experts!
I'm hoping to use the surfreg function on some data in which I can't make any
modifications to the subject directory (I'm usi
External Email - Use Caution
Hi there experts!
I’m hoping to use the surfreg function on some data in which I can’t make any
modifications to the subject directory (I’m using a cluster and the data is for
public use thus prohibits any changes to it).
I want to use the fsaverage
, February 3, 2023 10:56 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Directory not set properly?
External Email - Use Caution
Hello,
I am trying to run recon-all on my data and am encountering the following issue:
developer@developer-VirtualBox:~/freesurfer$ recon-all -subject
External Email - Use Caution
Hello,
I am trying to run recon-all on my data and am encountering the following issue:
developer@developer-VirtualBox:~/freesurfer$ recon-all -subject 3T00300 -i
/usr/home/developer/desktop/TIWI.nii -T2
/usr/home/developer/desktop/T2_Flair.nii -T2p
..
Thanks again,
David
-Original Message-
From: freesurfer-boun...@nmr.mgh.harvard.edu
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl
Sent: Friday, September 04, 2015 5:25 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] generating new FREESURFER dire
nt: Friday, September 04, 2015 5:25 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] generating new FREESURFER directory from linear
transform
Hi David
I don't think there's an easy way to do it all at once unless you apply the
transform to the orig.mgz then rerun recon-all (which
e a single subject’s freesurfer directory and apply a
single linear transform (I already have the .dat file I would like to use)
to all of the recon-all output (volumes, surfaces, label files, etc).
Essentially I would like to apply the transform and make a new freesurfer
directory that keeps as much o
Hi all,
I would like to take a single subject's freesurfer directory and apply a single
linear transform (I already have the .dat file I would like to use) to all of
the recon-all output (volumes, surfaces, label files, etc). Essentially I would
like to apply the transform and make
Hi all,
I recently downloaded and installed freesurfer for a Mac PowerPC. I tried
running recon-all on my data and an error message came up saying command
not found for talairach_avi and many other commands. I looked in my
/Applications/freesurfer/bin directory and that file wasn't there. All
t
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