Re: [Freesurfer] Custom LookUp Table

2015-05-27 Thread Z K
You can download the newest version of freeview by following the instruction for "Freeview dev version" on this page: https://surfer.nmr.mgh.harvard.edu/fswiki/Download Make sure you download the copy that goes which your version of freesurfer as listed in your FREESURFER_HOME/build-stamp.txt f

Re: [Freesurfer] Custom LookUp Table

2015-05-27 Thread Douglas N Greve
This appears to be a problem with the 5.3 version of freeview. I think there is a way to get a newer version. Perhaps Zeke can point it out. doug On 05/26/2015 08:30 AM, Robert Kraft wrote: > Doug, > > > Thanks for responding to my question about to a custom lookup table in > freeview. My apolo

Re: [Freesurfer] Custom LookUp Table

2015-05-21 Thread Douglas N Greve
Is that in freeview? I'm not sure what will happen if some segs are not in the colortable. Maybe Roupeng can weigh in. On 05/21/2015 12:56 PM, Robert Kraft wrote: > I would like to view just the hippocampus in the aseg.mgz file overlaid with > the brain.mgz. I created a custom lookup table by c

[Freesurfer] Custom LookUp Table

2015-05-21 Thread Robert Kraft
I would like to view just the hippocampus in the aseg.mgz file overlaid with the brain.mgz. I created a custom lookup table by commenting all entries except 0 (Unknown) and 17 (Left-Hippocampus). See below for a snippet of the lookup table. When I load this LookUp table I see numerous structu