Can you use mri_surfcluster to do this? It can output a binary mask,
annotation, or label. You just need to give it the input and a
threshold. If you just want constrain it to a given label, then you'll
need to create a mask.
doug
On 02/20/2015 09:14 PM, Eric Reavis wrote:
> Hello Freesurfers,
Hello Freesurfers,
I've run into issues trying to create functionally-defined ROIs on the
cortical surface in FreeSurfer 5.3.
I processed my functional localizer data in FsFast, which produced nice
activation maps on the cortical surface. I would like to create ROIs from
those maps (i.e., freesur
