Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2015-04-28 Thread Ferguson, B.
*To:* freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> <mailto:freesurfer@nmr.mgh.harvard.edu> *Subject:* [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2015-04-28 Thread Z K
> > *From:* freesurfer-boun...@nmr.mgh.harvard.edu > <mailto:freesurfer-boun...@nmr.mgh.harvard.edu> >

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2015-04-28 Thread Ferguson, B.
harvard.edu> mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of Matthew Riddle mailto:mrid...@nyspi.columbia.edu>> *Sent:* Thursday, October 23, 2014 7:48 AM *To:* freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> *Subject:* [Freesurfer] Crash o

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-11-06 Thread Z K
t;>>>> >>>>> I am encountering the exact same problem on Yosemite (10.10). The log >>>>> file is attached. Any ideas? I am pretty stumped. >>>>> >>>>> >>>>> Anthony >>>>> >>>>> >>>

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-11-05 Thread Anthony Dick
etty stumped. >>>> >>>> >>>> Anthony >>>> >>>> >>>> >>>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>>> on behalf of Matthew Ri

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-11-05 Thread Z K
------------ >>> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >>> on behalf of Matthew Riddle >>> >>> *Sent:* Thursday, October 23, 2014 7:48 AM >>> *To:* freesurfer@nmr.mgh.harvard.edu >&g

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-11-05 Thread Anthony Dick
*From:* freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Matthew Riddle *Sent:* Thursday, October 23, 2014 7:48 AM *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite) Dear Freesurfer Team, I

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-11-05 Thread Martin Reuter
] Crash on recon-all on Macbook Pro (Mavericks and Yosemite) Dear Freesurfer Team, I recently installed Freesurfer on a new Macbook pro, which was upgraded to Yosemite, and I re-installed X11 after the upgrade, but I'm still experiencing an issue with freesurfer that I'm hoping you might

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-11-05 Thread Anthony Dick
: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite) Dear Freesurfer Team, I recently installed Freesurfer on a new Macbook pro, which was upgraded to Yosemite, and I re-installed X11 after the upgrade, but I'm still experiencin

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-10-23 Thread Matthew Riddle
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Z K Sent: Thursday, October 23, 2014 12:08 PM To: Freesurfer support list Subject: Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite) Interesting. Ive never encountered that issue before but Ive also never conducted an ins

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-10-23 Thread Z K
Interesting. Ive never encountered that issue before but Ive also never conducted an install test on subject bert on Mavericks or Yosemite. Ill take a look. Thanks for the update. -Zeke On 10/23/2014 12:03 PM, Matthew Riddle wrote: > Hi Zeke, > > So I may have solved the issue. Since /applicati

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-10-23 Thread Matthew Riddle
Hi Zeke, So I may have solved the issue. Since /applications is write protected by default, I had to run the recon-all with sudo. But it seems like the subroutines of recon-all don't inherit the permissions, so I moved my Subjects directory to Documents, and then I can run recon-all without the

Re: [Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-10-23 Thread Z K
Matt, Can you send me the actual recon-all.log file? It might be helpful for me to diagnose the issue. Thanks. -Zeke On 10/23/2014 07:48 AM, Matthew Riddle wrote: > Dear Freesurfer Team, > > I recently installed Freesurfer on a new Macbook pro, which was upgraded > to Yosemite, and I re-install

[Freesurfer] Crash on recon-all on Macbook Pro (Mavericks and Yosemite)

2014-10-23 Thread Matthew Riddle
Dear Freesurfer Team, I recently installed Freesurfer on a new Macbook pro, which was upgraded to Yosemite, and I re-installed X11 after the upgrade, but I’m still experiencing an issue with freesurfer that I’m hoping you might have some idea about. Just to test the install and see what my tota