Re: [Freesurfer] Corpus Callosum segmentation reliability

2014-06-12 Thread Bruce Fischl
liano From: alessia_giuli...@hotmail.it To: freesurfer@nmr.mgh.harvard.edu Date: Fri, 6 Jun 2014 06:46:29 + Subject: Re: [Freesurfer] Corpus Callosum segmentation reliability Dear Bruce, the two subject dirs are here https://www.dropbox.com/sh/k1z5o0e6sq90qq0/AABx38QxKvxDhUe2lV9imaa9a. The ori

Re: [Freesurfer] Corpus Callosum segmentation reliability

2014-06-12 Thread Alessia Giuliano
Dear Bruce, did you see the images that I have sent you? Thanks, Alessia Giuliano From: alessia_giuli...@hotmail.it To: freesurfer@nmr.mgh.harvard.edu Date: Fri, 6 Jun 2014 06:46:29 + Subject: Re: [Freesurfer] Corpus Callosum segmentation reliability Dear Bruce, the two subject dirs are

Re: [Freesurfer] Corpus Callosum segmentation reliability

2014-06-05 Thread Alessia Giuliano
: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Corpus Callosum segmentation reliability hmmm, that is puzzling. Can you upload the two subject dirs with the rotated direction cosines and I'll take a look? thanks Bruce On Thu, 5 Jun 2014, Alessia Giuliano wrote: > Dear Bruce,

Re: [Freesurfer] Corpus Callosum segmentation reliability

2014-06-05 Thread Bruce Fischl
lessia Giuliano Date: Thu, 5 Jun 2014 08:30:10 -0400 From: fis...@nmr.mgh.harvard.edu To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Corpus Callosum segmentation reliability Hi Alessia when you say "the image was rotated" do you mean you actually transformed the image,

Re: [Freesurfer] Corpus Callosum segmentation reliability

2014-06-05 Thread Alessia Giuliano
to improve the CC segmentation in order to consider the volumes of its subregions to be reliable? Thank you, Alessia Giuliano Date: Thu, 5 Jun 2014 08:30:10 -0400 From: fis...@nmr.mgh.harvard.edu To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Corpus Callosum segmentation reliability H

Re: [Freesurfer] Corpus Callosum segmentation reliability

2014-06-05 Thread Bruce Fischl
Hi Alessia when you say "the image was rotated" do you mean you actually transformed the image, or you simply changed the image header to reflect a new orientation? I wouldn't think the latter would have a big effect, but the former will involve an additional image interpolation (blurring) a