samseg does not have a CC seg. You can get the CC with something like
mri_cc -aseg samseg/seg.mgz -o samseg/seg+cc.mgz -lta samseg/cc_up.lta
you can ignore the lta output
On 1/28/2025 7:00 PM, Taghizadeh Mortezaei, Nima wrote:
Dear FreeSurfer Support Team,
I am using FreeSurfer version 7.4.1
Dear FreeSurfer Support Team,
I am using FreeSurfer version 7.4.1 and recently ran SAMSEG on a subject’s MRI
data. However, I noticed that the corpus callosum does not appear as a distinct
label in the segmented structures. After reviewing the output files and label
definitions, I was unable to
