Re: [Freesurfer] Convert nifti atlas into .annot file

2019-09-10 Thread Greve, Douglas N.,Ph.D.
Run recon-all on the anatomical templates, then use mri_vol2surf (wiht --projfrac 0.5) to sample the segmentations onto the surface, then use mris_seg2annot to convert to annotation On 9/9/19 6:10 PM, Dev vasu wrote: > > External Email - Use Caution > > > Dear all, > > How can i create .

[Freesurfer] Convert nifti atlas into .annot file

2019-09-09 Thread Dev vasu
External Email - Use Caution Dear all, How can i create .annot files for both left and right hemisphere from nifti atlases http://www.gin.cnrs.fr/en/tools/aal/ are there any specific guidelines or commands for surface based parcellation ? Thanks Vasudev